Computational Structural Biology Lab
Source: http://www.csb.iitkgp.ac.in/applications/Nucpred/index.php Parent: http://www.csb.iitkgp.ac.in/
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Nucpred A Protein Binding Nucleotide Predictor
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Nucpred server allows user to predict protein-binding and non-binding nucleotides for a given RNA sequence. It uses the default RF based model developed with NC-triplet feature profile generated from the query sequence.
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Please submit the following: Items labelled (*) are mandatory
Paste query nucleotide sequence * (FASTA format only)\
Note: Please submit only one sequence at a time.
OR
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| Upload query sequence file* (FASTA format only) |
Please select the model: By default it takes Random Forest NC Triplet model.
Prediction model:
RF-NC-triplet RF-NC-quartet SVM RBF KNN \ \
Test Run
To test run the prediction server please click the "Test Run " button