# Publications

**Source**: https://physics-of-life.tu-dresden.de/team/pol-groups/doyle/publications
**Parent**: https://physics-of-life.tu-dresden.de/team/pol-groups/doyle

## 2025

Schultz, J., Patel, P.A., Aires, R., Wissing, L., Glatte, P., Seifert, M., Gentzel, M., Fitze, G., Doyle, A., Sandoval-Guzmán, T. 2025. [**Human fingertip regeneration follows clinical phases with distinct proteomic signatures**](https://doi.org/10.1038/s41536-025-00441-y)**.** npj Regen Med 10, 51.

## 2023

Yu, X., Doyle, A. 2023. [**Molecular Circuit Discovery for Mechanobiology of Cardiovascular Disease**](https://doi.org/10.1007/s40883-022-00264-z). Regen. Eng. Transl. Med. 9, 108–124.

## 2020

Walker J.L, Patterson L.HC, Rodriguez-Mesa E., Shields K., Foster J.S, Valentine M.T, Doyle A.M, Foster K.L. 2020. [**Controlled Single-Cell Compression With a High-Throughput MEMS Actuator.**](https://doi.org/10.1109/JMEMS.2020.3005514) Journal of Microelectromechanical Systems. :1–7.

Patterson LHC, Walker JL, Naivar MA, Rodriguez-Mesa E, Hoonejani MR, Shields K, Foster JS, Doyle AM, Valentine MT, Foster KL. 2020. [**Inertial flow focusing: a case study in optimizing cellular trajectory through a microfluidic MEMS device for timing-critical applications.**](https://doi.org/10.1007/s10544-020-00508-1) Biomed Microdevices. 22(3):52.

## 2019

Beach S, Grundeen S, Doyle A, Theogarajan L. 2019. [**Fabrication and validation of flexible 3D pillar electrodes for neural electrophysiological recording.**](https://doi.org/10.1088/2631-8695/ab407e) Engineering Research Express.

Patterson L.HC, Walker J.L, Rodriguez-Mesa E., Shields K., Foster J.S, Valentine M.T, Doyle A.M, Foster K.L. 2019. [**Investigating Cellular Response to Impact With a Microfluidic MEMS Device.**](https://doi.org/10.1109/JMEMS.2019.2948895) Journal of Microelectromechanical Systems. :1–11.

## 2018

Walker J, Patterson L, Rodriguez-Mesa E, Foster J, Doyle A, Foster K. 2018. [**The MEMS mHammer: Impacting Neuroscience One Cell at a Time.**](https://doi.org/10.1016/j.bpj.2017.11.3624) BIOPHYSICAL JOURNAL. 114:672A.

Brugger MS, Grundeen S, Doyle A, Theogarajan L, Wixforth A, Westerhausen C. 2018. [**Orchestrating cells on a chip: Employing surface acoustic waves towards the formation of neural networks.**](https://doi.org/10.1103/PhysRevE.98.012411) PHYSICAL REVIEW E. 98:012411.

## 2017

Jang S, Choubey S, Furchtgott L, Zou L-N, Doyle A, Menon V, Loew EB, Krostag A-R, Martinez RA, Madisen L et al. 2017. [**Dynamics of embryonic stem cell differentiation inferred from single-cell transcriptomics show a series of transitions through discrete cell states.**](https://doi.org/10.7554/elife.20487) ELIFE. 6:e20487.

Lucio AA, Mongera A, Shelton E, Chen R, Doyle AM, Campas O. 2017. [**Spatiotemporal variation of endogenous cell-generated stresses within 3D multicellular spheroids.**](https://doi.org/10.1038/s41598-017-12363-x) Sci Rep 7, 12022

## 2016

Thomsen ER, Mich JK, Yao Z, Hodge RD, Doyle AM, Jang S, Shehata SI, Nelson AM, Shapovalova NV, Levi BP et al. 2016. [**Fixed single-cell transcriptomic characterization of human radial glial diversity.**](https://doi.org/10.1038/nmeth.3629) Nat Methods 13, 87–93

## 2010

Doyle AM. 2010. **Conservation of mechanosignaling: Responses of human adult mesenchymal stem cells and differentiated vascular cells to applied physical forces.** ProQuest Dissertations and Theses. :275

## 2009

Ahsan T, Doyle AM, Nerem R. 2009. **Effect of Fluid Shear Stress on Embryonic Stem Cells.** FASEB JOURNAL. 23

Doyle AM, Nerem RM, Ahsan T. 2009. **Human Mesenchymal Stem Cells Form Multicellular Structures in Response to Applied Cyclic Strain.** ANNALS OF BIOMEDICAL ENGINEERING. 37:783–793

Ahsan T, Doyle AM, Duffy GP, Barry F, Nerern RM. 2009. **Stem Cells and Vascular Regenerative Medicine.** Proceedings of the ASME Summer Bioengineering Conference 2008, PTS A AND B

## 2005

Goldstein AM, Brewer KC, Doyle AM, Nagy N, Roberts DJ. 2005. **BMP signaling is necessary for neural crest cell migration and ganglion formation in the enteric nervous system.** Mech Dev. 122(6):821–33

Barbara PDe Santa, Williams J, Goldstein AM, Doyle AM, Nielsen C, Winfield S, Faure S, Roberts DJ. 2005. **Bone morphogenetic protein signaling pathway plays multiple roles during gastrointestinal tract development.** Dev Dyn. 234(2):312–22

## 2004

Doyle AM, Roberts DJ, Goldstein AM. 2004. **Enteric nervous system patterning in the avian hindgut.** Dev Dyn. 229(3):708–12