# Bioinformatics and Systems Biology

**Source**: https://catalog.ucsd.edu/faculty/BIOI.html
**Parent**: https://catalog.ucsd.edu/front/courses.html

[ [undergraduate program](https://catalog.ucsd.edu/curric/BIOI-ug.html) | [graduate program](https://catalog.ucsd.edu/curric/BIOI-gr.html) | [courses](https://catalog.ucsd.edu/courses/BIOI.html) ]

*All courses, faculty listings, and curricular and degree requirements described herein are subject to change or deletion without notice.*

#### Participating Faculty

#### School of Engineering:

#### Department of Bioengineering

Xiaohua Huang, *Professor*

Kevin King, *Associate**Professor, Bioengineering and Department of Medicine*

Prashant Mali,*Professor*

Andrew McCulloch, *Professor*

Christian Metallo, *Associate Professor*

Bernhard Palsson, *Professor*

Benjamin Smarr, *Assistant Professor*

Shankar Subramaniam, *Professor*

Yingxiao Wang,*Professor*

Kun Zhang,*Professor*

Sheng Zhong,*Professor*

#### Department of Computer Science and Engineering

Vineet Bafna, *Professor*

Nuno Bandeira,*Professor, Computer Science and Skaggs School of Pharmacy and Pharmaceutical Sciences*

Melissa Gymrek, *Associate Professor, Computer Science and Engineering and Department of Medicine*

Niema Moshiri, *Associate**Teaching Professor*

Pavel Pevzner, *Ronald R. Taylor Chair, Professor*

Qi (Rose) Yu, *Assistant Professor*

#### Department of Electrical and Computer Engineering

Siavash Mirarab, *Associate Professor*

Yatish Turakhia, *Assistant Professor*

#### Halıcıoğlu Data Science Institute

Tiffany Amariuta, *Assistant Professor*

#### School of Biological Sciences:

#### Department of Cell and Developmental Biology

Steven Briggs, *Professor*

Amy Kiger, *Associate Professor*

Julian Schroeder, *Professor*

#### Department of Molecular Biology

Nan Hao,*Professor*

Jeff Hasty, *Professor, Molecular Biology and Department of Bioengineering*

Christopher Lee, *Assistant Professor*

Gurol Suel,*Professor*

#### Department of Ecology, Behavior, and Evolution

Scott Rifkin, *Associate Professor*

Dominik Wodarz, *Professor*

#### La Jolla Institute for Immunology

Ferhat Ay, *Associate Professor and UC San Diego* *Assistant Adjunct Professor, Pediatrics*

Tal Einav, *Assistant**Professor and UC San Diego* *Assistant Adjunct Professor, Medicine*

Samuel Myers, *Assistant Professor and UC San Diego Assistant Adjunct Professor, Pharmacology*

Bjoern Peters, *Professor and UC San Diego Associate Adjunct Professor, Medicine*

Anjana Rao, *Professor and UC San Diego Adjunct Professor, Pharmacology*

Miguel Reina-Campos, *Assistant Professor and UC San Diego Assistant Adjunct Professor, Pharmacology*

Pandurangan Vijayanand, *Professor and UC San Diego Associate Adjunct Professor, Medicine*

#### Salk Institute for Biological Studies

Wolfgang Busch, *Professor and UC San Diego Associate Adjunct Professor, Cell and Developmental Biology*

Joseph Ecker, *Professor and UC San Diego* *Adjunct* *Professor, Cell and Developmental Biology*

Ronald M. Evans, *Professor and UC San Diego* *Adjunct Professor, Cell and Developmental Biology*

Fred Gage, *President and Professor and UC San Diego* *Adjunct Professor, Neurobiology*

Susan Kaech, *Professor and UC San Diego Adjunct Professor, Molecular Biology*

Pallav Kosuri, *Assistant Professor and UC San Diego Assistant Adjunct Professor, Molecular Biology*

Julie Law, *Associate Professor and UC San Diego* *Associate**Adjunct Professor, Cell and Developmental Biology*

Graham McVicker, *Associate**Professor and UC San Diego* *Assistant Adjunct Professor, Cellular and Molecular Medicine*

#### Sanford Burnham Prebys

Lukas Chavez, *Associate Professor and UC San Diego Assistant Adjunct Professor, Genomics and Precision Medicine*

#### Scripps Institution of Oceanography

Andrew Allen, *Professor*

Simone Baumann-Pickering,*Professor*

Terry Gaasterland, *Professor, Program Director*

#### The Scripps Research Institute

Xin Jin, *Associate Professor and UC San Diego Assistant Adjunct Professor, Cognitive Science*

#### School of Physical Sciences:

#### Department of Chemistry and Biochemistry

Neville Bethel, *Assistant Professor*

Andrew McCammon, *Professor*

Susan Taylor, *Professor*

Wei Wang, *Professor*

#### Department of Mathematics

Michael Holst, *Professor*

Glenn Tesler,*Professor*

Ruth Williams, *Professor*

Ronghui Xu, *Professor, Mathematics, Herbert Wertheim School of Public Health and Human Longevity Science and Halıcıoğlu Data Science Institute*

#### Department of Physics

Terence Hwa, *Professor*

#### School of Social Sciences:

#### Department of Cognitive Science

Eran Mukamel, *Associate**Professor*

#### School of Medicine:

#### Division of Biomedical Informatics

Aaron Boussina, *Assistant Adjunct Professor*

Kathleen Curtius, *Assistant Professor*

Robert El-Kareh*, Associate Clinical Professor*

Michael Hogarth, *Clinical Professor*

Jejo Koola, *Assistant Clinical Professor*

Shamim Nemati, *Associate**Professor*

Amy Sitapati, *Clinical Professor, Medicine and Interim Chief, Division of Biomedical Informatics*

Timothy Wen, *Assistant Professor*

#### Department of Cellular and Molecular Medicine

Ludmil Alexandrov, *Associate Professor*

Bogdan Bintu, *Assistant Professor*

Christopher Glass, *Professor*

Bing Ren, *Professor*

Gene Yeo,*Professor*

Huilin Zhou, *Professor*

#### Department of Medicine

Christopher Benner, *Assistant Professor*

Hannah Carter, *Professor and Program Associate Director*

Neil Chi, *Professor*

Emma Farley, *Associate**Professor*

Rodney Gabriel, *Associate**Professor*

Alon Goren, *Associate**Professor*

Sven Heinz, *Assistant Professor*

Trey Ideker, *Professor*

Richard Kolodner, *Professor*

Amit Majithia, *Associate**Professor*

Jill Mesirov, *Professor, Medicine*

Michael Rosenfeld, *Professor*

Pablo Tamayo, *Professor*

Joel Wertheim, *Associate Professor*

#### Department of Neurosciences

Joseph Gleeson, *Professor*

#### Department of Reproductive Medicine

Heidi Cook-Andersen, *Assistant Professor, Reproductive Medicine and Biological Sciences*

Kathleen Fisch, *Assistant Professor*

Louise Laurent,*Professor*

#### Department of Surgery

Joseph Califano, *Professor and Physician-in-Chief*

Theresa Guo, *Assistant Professor*

Jason Sicklick, *Professor*

#### Department of Pathology

Hiutung Chu, *Associate Professor, Pathology*

#### Department of Pediatrics

Vikas Bansal, *Associate Professor*

Alejandro Chavez, *Associate Professor*

Kelly Frazer, *Professor*

Kyle Gaulton, *Assistant Professor*

Robin Knight, *Professor*

Nathan Lewis,*Professor*

Hojun Li, *Assistant Professor*

Pia Pannaraj, *Professor*

Tariq Rana, *Distinguished Professor*

Debashis Sahoo, *Associate Professor*

Elizabeth Winzeler, *Professor*

Karsten Zengler, *Professor*

#### Department of Psychiatry

Christine Cheng, *Associate Professor in Residence*

Lilia Iakoucheva,*Professor*

Carolina Makowski, *Assistant Professor*

Abraham Palmer, *Professor*

Sandra Sanchez-Roige, *Associate Professor*

Nicholas Schork, *Adjunct Professor*

Jonathan Sebat,*Professor*

#### Department of Pharmacology

Mohit Jain, *Associate Professor, Pharmacology and Medicine*

Johannes Schoeneberg, *Assistant Professor, Pharmacology, Chemistry and Biochemistry*

#### Department of Radiology

Chi-Hua Chen, *Associate Adjunct Professor, Radiology*

Albert Hsiao, *Professor in Residence**, Radiology*

#### Department of Regenerative Medicine

Qingfei Jiang, *Assistant Professor*

#### Skaggs School of Pharmacy and Pharmaceutical Sciences

Ruben Abagyan, *Professor*

Pieter Dorrestein, *Professor*

Michael Gilson, *Professor*

Vivian Hook, *Professor*

Adrian Jinich, *Assistant Professor*

Palmer Taylor*, Professor*