Metadata
Title
TF-NA Interface Dataset
Category
general
UUID
bef78ff0771743629d6dd74e33cf4e58
Source URL
http://www.csb.iitkgp.ac.in/databases/TFNRDv1.0/TFNRDv1.0_PNA.html
Parent URL
http://www.csb.iitkgp.ac.in/databases/TFNRDv1.0/tfnrd.html
Crawl Time
2026-03-18T08:15:52+00:00
Rendered Raw Markdown

TF-NA Interface Dataset

Source: http://www.csb.iitkgp.ac.in/databases/TFNRDv1.0/TFNRDv1.0_PNA.html Parent: http://www.csb.iitkgp.ac.in/databases/TFNRDv1.0/tfnrd.html

Unique TF-NA Interfaces

This dataset characterizes unique transcription factor interfaces with nucleic acids based on interface identity.

Table S1.C: Unique interface between protein and nucleic acid present in transcription factors dataset.

PDB ID
I. DNA-binding Transcription Factors
1A02
1A02
1A0A
1AM9
1AN2
1AN4
1APL
1AWC
1B01
1B3T
1B72
1B72
1BC8
1BF5
1BL0
1BVO
1CF7
1CF7
1CGP
1CGP
1CKT
1CMA
1D66
1DDN
1DH3
1DP7
1DP7
1EFA
1EGW
1EXJ
1GD2
1GLU
1GT0
1GXP
1H88
1H88
1HDD
1HDD
1HJB
1HJB
1HWT
1IC8
1IF1
1IF1
1IGN
1IHF
1IO4
1JE8
1JFI
1JMC
1JT0
1KU7
1L3L
1LMB
1LQ1
1MDY
1MHD
1MNM
1MNN
1N6J
1NGM
1NKP
1NLW
1NVP
1OCT
1ODH
1P51
1PAR
1PAR
1PDN
1PNR
1PP7
1PUE
1QPI
1QRV
1R71
1R8D
1RAM
1RZR
1SAX
1SKN
1SVC
1T2K
1TQE
1TRR
1TTU
1TUP
1TUP
1U8B
1UUT
1VOL
1VOL
1VTN
1W0T
1W0T
1XBR
1XPX
1YRN
1YRN
1YSA
1YTB
1YTB
1YTF
1YTF
1Z9C
1ZAA
1ZME
2A07
2A07
2A07
2BNW
2BNW
2BOP
2BSQ
2BSQ
2C62
2C9L
2D5V
2E1C
2ER8
2ES2
2GLI
2H27
2NLL
2NLL
2O49
2OR1
2OR1
2P5L
2QL2
2R1J
2R1J
2RBF
2UZK
2VY1
2W7N
2YPA
2YVH
2ZHG
3A5T
3BRD
3BS1
3CLC
3CLC
3D2W
3D2W
3DFX
3DNV
3DNV
3E6C
3EYI
3EYI
3FDQ
3GFI
3GNA
3GXQ
3GZ6
3H0D
3HTS
3IGM
3IKT
3IV5
3JSO
3KET
3KS8
3LSP
3MLN
3MZH
3N4M
3N4M
3N4M
3N7Q
3O9X
3ON0
3Q5F
3QMB
3R2C
3RN2
3RN2
3TQ6
3U3W
3UGM
3UGO
3UK3
3UK3
3VOK
3VWB
3W6V
3ZHM
3ZKC
3ZPL
3ZPL
3ZVK
3ZVK
4EGY
4EGY
4F6M
4G7H
4G7H
4G92
4G92
4G92
4H10
4HF1
4HLY
4HQE
4HQU
4I2O
4IHT
4IQR
4IZZ
4J19
4J19
4J2X
4JCX
4JL3
4JL3
4KFC
4LDX
4LLN
4LMG
4LUP
4M8B
4MTD
4MTD
4NHJ
4ON0
4PZI
4QTJ
4R22
4RB1
4RB1
4ROC
4ROC
4UX5
4UX5
4WLS
4WU4
4XRM
4XRM
4Y00
4Z3C
5D23
5D8C
5DY0
5EG6
5EYB
5F7Q
5FD3
5FMP
5GNJ
5GPC
5GPC
5GZB
5H3R
5HLG
5HSO
5HSO
5I44
5J2Y
5J3E
5JGH
5JGH
5JLT
5JUB
5K5Q
5K5Q
5K5Q
5K7Z
5LEJ
5LXU
5MHJ
5MPF
5OND
5TW1
5TW1
5TW1
5TW1
5TW1
5VL9
5WX9
5X11
5X5L
5XFP
5XFQ
5XSK
5YEJ
5YI2
5ZD4
5ZGN
6ASB
6C2S
6C31
6C31
6CG8
6CHV
6CRO
6EL8
6FAS
6FN0
6G1T
6HP7
6IDE
6IR8
6J4F
6JBX
6JGW
6LB3
6LUI
6LXN
6MRJ
6MRJ
6NSM
6ON0
6P0S
6P1A
6P1A
6P1A
6Q2B
6QFD
6RYD
6W1A
6ZA3
7AMN
7B0C
7BCB
7BHY
7BZG
7C0G
7C9O
7DVV
7EL3
7EOF
7ET4
7ET6
7ET6
7F2F
7F9H
7F9H
7JNP
7LH9
7PRV
7PZA
7T8K
7TZ1
7V6W
7V6W
7V9F
7VJQ
7VP1
7X5G
7XQ5
7YUK
7YZG
7ZG5
8B4B
8B4B
8B4B
8B4B
8EB5
8EJO
8HML
8HML
8IKE
8J0K
8K4L
8K86
8P5Q
8PW0
8UVK
8YEY
1A66
1AHD
1C7U
1CJG
1CO0
1F4S
1G4D
1GAT
1GCC
1HRY
1J4W
1KQQ
1LFU
1LO1
1MSE
1O4X
1TF3
1XS9
1YUI
1ZGW
2HDC
2JX1
2K1N
2K1N
2KAE
2KKF
2KMK
2KO0
2LEF
2LEV
2LEX
2MAP
2MRU
2MXF
2O8K
2P7C
2STT
2Z33
II. RNA-binding Transcription Factors
1C9S
1WMQ
2A8V
2ASB
4GHA
4GHA
4GHA
4GHA
5M3H
6FHI
8F5G
1L1C
1QFQ
III. DNA/RNA-binding Transcription Factors
5XOG
5ZX2

aPDB ID: Four letter protein data bank ID; \ bProtein: Name of the biomolecules; \ cSource Organisms: Source of the sequence obtained from various organisms; \ dProtein length: Length of the amino acid sequence; \ eExperimental Methods: Biophysical methods used for the structure determination (X: X-ray, N:NMR); \ fResolution (Å): Resolution of the macromolecules; \ gOligomeric State: Total number of biomolecules in a biological assembly; \ hPDB iChain Id: Chain Identifier from the PDB file; \ jChain: Protein ,DNA and RNA chain involved in unique interface; \ kBSA: buried surface area.